top of page
nanoparticle mediated gene delivery to plants.jpg

Nanoparticle-Mediated Delivery
for Improved Plant Genetic Engineering 

Welcome to the forefront of our research initiative, dedicated to advancing plant genetic engineering by developing nanomaterials capable of delivering biomolecules to crops. Settled at the intersection of nanotechnology and agriculture, our research aims to establish platforms for the precise delivery of biomolecules, such as proteins, nucleic acids, and small molecules, to plant cells. To this end, current projects in our lab focus on carbon nanomaterials, virus-like particles (VLPs), and extracellular Contractile Injection systems (eCIS) as promising platforms for biomolecular delivery. By engineering these tools, we aim to enable efficient and ubiquitous delivery of CRISPR reagents to model organisms and important crops for both transient and stable transformation. Our overarching objective is to create groundbreaking technologies to advance plant synthetic biology and elevate crop productivity and sustainability.

Screenshot 2026-03-17 at 8.54.48 AM.png

Extracellular Contractile Injection Systems (eCIS) for Protein Delivery into Plant Cells

Screenshot 2026-03-17 at 9.10.48 AM.png

eCIS are phage tail–derived nanomachines that enable direct translocation of protein cargo across cellular membranes. Our work establishes eCIS as a programmable platform for efficient delivery of functional proteins into plant cells, addressing a central limitation in plant biotechnology. A key feature of eCIS systems is their modularity. Both targeting specificity and payload composition can be rationally engineered: receptor-binding proteins can be modified to retarget particles to plant cell surfaces, while effector domains can be replaced with proteins of interest, such as enzymes, transcription factors, or genome-engineering tools. This enables precise control over where and how proteins are delivered, supporting applications that require spatial or cell-type specificity.

 

We demonstrate that engineered eCIS particles enable efficient, direct delivery of functional proteins into plant cells, resulting in measurable intracellular activity without DNA integration. Delivered cargo retains activity in planta, establishing eCIS as a viable platform for transient, programmable manipulation of plant cellular functions across species and tissue contexts. Delivered proteins can modulate signaling pathways, reprogram gene expression, or perform catalytic activities directly upon entry. A central objective of our research is to translate eCIS, a naturally evolved microbial weapon, into a scalable, programmable delivery technology for plants. By integrating protein engineering, structural biology, and plant gene editing, we aim to define design principles governing targeting efficiency, cargo loading, and intracellular activity. Ultimately, this work establishes eCIS as a new class of biologically derived nanodevices for precision plant engineering, complementing and extending existing delivery modalities.

Screenshot 2026-03-17 at 9.11.38 AM.png

TMV Virus-like Particles (VLPs) for Small Molecule Delivery to Plants

Screenshot 2026-03-17 at 8.52.52 AM.png

Tobacco mosaic virus (TMV)–derived virus-like particles (VLPs) provide a structurally defined, biocompatible nanoplatform for delivering small molecule cargoes to plants. These rod-shaped protein assemblies retain the self-organizing architecture and high aspect ratio of TMV while lacking infectious viral genomes, enabling precise cargo loading without replication or pathogenicity. Their well-characterized assembly, surface chemistry, and environmental stability make TMV VLPs particularly suitable for agricultural deployment.

 

Our work leverages TMV VLPs as programmable carriers for delivering priming agents and bioactive molecules directly to plant tissues. We encapsulate or associate small molecules such as polyamines (e.g., putrescine) and immune elicitors (e.g., flg22 peptide) within or on the VLP scaffold to enable controlled transport, enhanced stability, and sustained release. Upon application, VLPs facilitate efficient leaf and tissue penetration, protect cargo from rapid degradation, and enable localized or systemic distribution within the plant.

 

To expand functionality and optimize performance, we integrate multiple engineering strategies spanning rational protein design, directed evolution, and bioorthogonal conjugation chemistries. Rational engineering enables precise modification of coat protein interfaces and surface residues to tune assembly, stability, and cargo affinity. Directed evolution approaches allow selection of VLP variants with improved delivery efficiency or environmental robustness. In parallel, bioorthogonal click chemistry strategies enable site-specific and modular attachment of diverse cargoes, decoupling particle assembly from payload identity and enabling scalable, chemically defined formulations.

Screenshot 2026-03-17 at 8.55.11 AM.png

Carbon Dot-Mediated Gene Delivery

Nanodots.png

The current lack of efficient tools for targeted delivery of biomolecules and controlled cargo release in plants is a significant obstacle to plant biology and genetic engineering. This challenge has become more pressing as the importance of addressing food insecurity and the climate crisis has increased. With the need to increase crop yields by 56% to sustain a growing population and the impending threat of a 24% reduction in maize yields by 2030, there is a critical need for improved solutions. Plant genetic engineering faces hurdles due to the rigid plant cell wall, which has a strict size-exclusion limit and high turgor pressure, making it challenging to transport biomacromolecules. Existing delivery methods have a limited plant range and lack specificity for targeting organelles. In response, the Demirer lab is developing carbon nanoparticles to enable the controlled release of biocargoes in plant cells. This innovation holds promise for enhancing CRISPR-Cas-mediated genetic engineering in both somatic and stem cells in plants, offering a potential solution to current limitations posed in plant genetic manipulation techniques.

Plant Genetic Engineering via Nanoparticle-Mediated Meristem Transformation

Meristem.png

The shoot apical meristem (SAM) is located at the growing tip of plants and serves as a reservoir of stem cells, responsible for generating all aboveground plant organs. This makes it an ideal target for achieving heritable gene editing, without the need for tedious and complex tissue culture or regeneration processes. Edited stem cells within the SAM can ultimately give rise to edited germ cells in the flower, resulting in heritable genetic modifications in subsequent generations. Building on the established synthesis routes for VLPs and carbon nanomaterials in our lab, we are developing a nanoparticle-based delivery system to efficiently deliver and transiently express CRISPR cargoes in the SAM for heritable, transgene-free plant gene editing.

Related publications

 

Legendre MG., Heredia A., Colee C. Demirer GS‡. Extracellular contractile injection systems for high-efficiency protein delivery to plants. bioRxiv (2025).

 

​

​

​​​​

​

Li E.*, Geng Y.*, Khristoforova TR., Wang Y., Jones J., Demirer GS‡. Vacuum and sonication treatment enables efficient transient gene expression in various monocot and eudicot plant seedlings. ACS Synthetic Biology (2026).

​

​​​​

​

​

​

Krasley AT.*, Li E.*, Galeana JM., Bulumulla C., Beyene AG.‡, Demirer GS.‡ Carbon nanomaterial fluorescent probes and their biological applications. Chemical Reviews, 124 (6), (2024).

​

​

​

​​

​

​

Legendre, M. G., Pistilli, V. H., & Demirer, G. S.‡ Chemical conjugation innovations for protein nanoparticles. Trends in Chemistry (2024).

Screenshot 2025-04-28 at 4.53.11 PM.png
image.png
image.png

Demirer Lab

  • Twitter

California Institute of Technology
Division of Chemistry and Chemical Engineering

©2021 by Demirer Lab
All Rights Reserved.

bottom of page